Clinical Data Scientist (NLP)

Position Title: Clinical Data Scientist (NLP) About the Job Duration: 12-month contract with possibility of extension Work Location : Gainesville, FL 32611 Job : 25-03148 Internal Position Title - Data Architect/ Data Modeler/ Database Analyst/ Data Warehouse Analyst/ Product Developer Scope of work NLP Pipeline Development and Text Analysis - 35% Build and maintain pipelines using tools such as MedSpaCy, cTAKES, or similar to extract structured variables from clinical notes. Tune entity recognition, concept mapping, and negation detection to support patient-level feature generation. Document pipeline logic and validation metrics. Structured EHR Feature Engineering - 25% Develop tools to extract, clean, and organize structured EHR variables (e.g., labs, medications, diagnoses). Apply clinical standards (e.g., OMOP, FHIR) to support semantic consistency and cross-site interoperability. Transform EHR data into research-ready formats aligned with modeling needs. Temporal Alignment and Mul...